Yeah, as someone who's been a Nintendo fan much longer than any other gaming company, I was always annoyed by EGM's blatant anti-Nintendo bias over the years, with next-to-no coverage of Gamecube & Game Boy/DS games and not even all that much Wii coverage, considering how popular the system's been. I don't think they were getting kickbacks from all the Playstation and Xbox games that they pimped on their cover every damn month for years (from GTA3 to Bioshock)...but they did run magazines for those systems, and they didn't for Nintendo. Made me a little cynical about their practices. However, they did have some good articles and they always had entertaining reviews (including Seanbaby, whom I've liked ever since his website back in the early '00s), but even then one of the main things that stick in my mind about EGM (and I don't remember if this was brought up here or elsewhere) is the douchebag comments that constantly were made in their letter column responses. Just disrespectful, sophomoric crap. During the brief period between Nintendo Power's revamp in 2005 and its sale to Future US last year, they aimed for a similarly sarcastic tone and it worked a lot better because they didn't have such contempt for their average reader. I thought that was telling of the competing attitudes of the two companies.
Overall, it's sad they're gone but they were losing their touch by the end of decade anyway.